Description Usage Arguments Author(s) References
View source: R/simulate_tree.R
Simulates the time before the splitting of the marks into two different fragments, and the size of the fragment at this time.
1 | simulate.Tau.X(epsilon, x, alpha, beta, n, ab = FALSE, eta = 1, x.ab = 1, lambda = NULL)
|
epsilon |
Minimum size of unsampled splits (see appendix 1) |
x |
Initial fragment size |
alpha |
Clade age-richness index |
beta |
Imbalance index |
n |
Number of marks |
ab |
Boolean, should the abundances be computed as well? (default to FALSE) |
eta |
Clade abundance-richness index (if ab) |
x.ab |
Initial abundance |
lambda |
Optional, vector of lambda_epsilon returned by the function lambda_N. If set to NULL (the default) it will be computed inside the function |
Odile Maliet, Fanny Gascuel & Amaury Lambert
Maliet O., Gascuel F., Lambert A. (2018) Ranked tree shapes, non-random extinctions and the loss of phylogenetic diversity, bioRxiv 224295, doi: https://doi.org/10.1101/224295
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