API for bcm-uga/pcadapt
Fast Principal Component Analysis for Outlier Detection

Global functions
BED_rsvd Man page Source code
assign.int.labels Man page Source code
bedadapt Man page Source code
bedadapt-class Man page
bedadaptXPtr Source code
bedadapt_RC Man page
cart2bary_cpp Man page Source code
clumping Man page Source code
clumping_cpp Source code
cmpt.stat Man page Source code
cmpt_af Source code
cmpt_af_matrix Source code
cmpt_cov_cpp Man page Source code
cmpt_global_pca Man page Source code
cmpt_loadings Man page Source code
cmpt_local_pca Man page Source code
cmpt_minor_af Man page Source code
covRob_cpp Man page Source code
create.pcadapt Man page Source code
display.local.pca Man page Source code
get.output.name Man page Source code
get.pc Man page Source code
get.pool.matrix Man page Source code
get.pop.names Man page Source code
get.score.color Man page Source code
get_fitted_matrix Source code
get_nb_ind Man page Source code
get_pop_size Man page Source code
get_size_cpp Man page Source code
get_window Man page Source code
impute.pcadapt Man page Source code
impute_geno Man page Source code
impute_geno_pop Man page Source code
lfmm2pcadapt Man page Source code
linReg Source code
loc.anc.plotting Man page Source code
lrfunc_cpp Man page Source code
manhattan.plotting Man page Source code
matrix_rsvd Man page Source code
neutral.plotting Man page Source code
pca_rotation Man page Source code
pcadapt Man page Source code
ped2pcadapt Man page Source code
plot.pcadapt Man page Source code
print_convert Man page Source code
prodGx_matrix Source code
prodMatVec Source code
prodtGx_matrix Source code
prodtMatVec Source code
pvalqq.plotting Man page Source code
rdadapt Man page Source code
read.pcadapt Man page Source code
residuals_to_stat Man page Source code
run.pcadapt Man page Source code
sample_geno_file Man page Source code
sample_geno_matrix Man page Source code
scale_geno Man page Source code
scan.intro Man page Source code
score.plotting Man page Source code
scree.plotting Man page Source code
slidingWindows_fast Man page Source code
slidingWindows_new Man page Source code
svd.pcadapt Man page Source code
updt_local_scores Man page Source code
vcf2pcadapt Man page Source code
vcf_convert Man page Source code
bcm-uga/pcadapt documentation built on Nov. 7, 2017, 8:16 a.m.