Man pages for bcm-uga/pcadapt
Fast Principal Component Analysis for Outlier Detection

bed2matrixConvert a bed to a matrix
get.pcGet the principal component the most associated with a...
get.pop.namesRetrieve population names
get.score.colorPopulation colorization
get_statisticspcadapt statistics
hist_plotNeutral Distribution Estimation
lfmm2pcadaptConvert lfmm files
manhattan_plotManhattan Plot
pcadaptPrincipal Component Analysis for outlier detection
ped2pcadaptConvert ped files
plot.pcadaptpcadapt visualization tool
qq_plotp-values Q-Q Plot
read.pcadaptFile Converter
run.pcadaptShiny app
score_plotPrincipal Components Analysis Scores Plot
scree_plotPrincipal Components Analysis Scree Plot
vcf2pcadaptvcfR-based converter
vcf_convertConvert vcfR genotype matrices
writeBedWrite PLINK files
bcm-uga/pcadapt documentation built on June 14, 2018, 5:50 a.m.