plot.Ag: Plot CDOM spectra

In belasi01/RspectroAbs: Processing absorbance spectra from spectrophotometer

Description

Plot the CDOM spectra stored in an Ag list returned by process.Ag.

Usage

## S3 method for class 'Ag'
plot(path.png, Ag, PNG = TRUE)

Arguments

path.png	is the path where the png file will be saved
Ag	is a list return by process.Ag.
PNG	is a logical parameter indicating whether or not the plots are save in a PNG file. Default is TRUE.

Details

Four plots are produced with the same three spectra but with different z-axis and x-axis. The three spectra are the raw (black), the corrected spectra assuming NULL point at 690 nm (red) and the fitted spectra on the 350 to 500 nm range (green).

Author(s)

Simon Belanger

See Also

process.Ag

Examples

setwd(path.package("RspectroAbs"))
sample = read.LAMBDA850("data/433423.Sample.Raw.csv1")
Ag = process.Ag(sample, ID=433423,
               Station="L3_20.5", Depth=99,pathlength=0.1)
plot.Ag("./",Ag, PNG=FALSE)

belasi01/RspectroAbs documentation built on July 27, 2020, 9:52 p.m.