API for ben18785/incidenceinflation
Estimate R0 Given Case Reporting Delays
| Global functions | |
|---|---|
| ILI_2014 | Man page |
| accept_reject | Man page Source code |
| check_parameter_names | Source code |
| combine_chains | Man page Source code |
| conditional_cases_logp | Man page Source code |
| construct_w_matrix | Man page Source code |
| convert_df_to_posterior_format | Man page Source code |
| convert_results_to_posterior_format | Man page Source code |
| create_reporting_from_single_parameters_df | Man page Source code |
| detected_after_unobserved_prob | Man page Source code |
| dgamma_mean_sd | Man page Source code |
| expected_cases | Man page Source code |
| gamma_discrete_pmf | Man page Source code |
| generate_snapshots | Man page Source code |
| max_uncertain_days | Man page Source code |
| maximise_reporting_logp | Man page Source code |
| mcmc | Man page Source code |
| mcmc_single | Man page Source code |
| measles_NL_2013 | Man page |
| metropolis_step | Man page Source code |
| metropolis_step_overdispersion | Man page Source code |
| metropolis_steps | Man page Source code |
| nb_log_likelihood_Rt_piece | Man page Source code |
| observation_process_all_times_logp | Man page Source code |
| observation_process_logp | Man page Source code |
| observation_process_single_logp | Man page Source code |
| observed_cases | Man page Source code |
| observed_cases_single | Man page Source code |
| observed_cases_trajectory | Man page Source code |
| pgamma_mean_sd | Man page Source code |
| prior_reporting_parameters | Man page Source code |
| propose_overdispersion_parameter | Man page Source code |
| propose_reporting_parameters | Man page Source code |
| qgamma_mean_sd | Man page Source code |
| sample_Rt | Man page Source code |
| sample_Rt_single_piece | Man page Source code |
| sample_cases_history | Man page Source code |
| sample_nb_Rt_piece | Man page Source code |
| sample_or_maximise_gamma | Man page Source code |
| sample_reporting | Man page Source code |
| sample_true_cases_single_onset | Man page Source code |
| state_process_logp | Man page Source code |
| state_process_nb_logp_all_onsets | Man page Source code |
| thin_series | Man page Source code |
| thin_single_series | Man page Source code |
| true_cases | Man page Source code |
| true_cases_single | Man page Source code |
| undetected_prob | Man page Source code |
| weights_series | Man page Source code |
