undetected_prob: Probability case remains undetected over time
In ben18785/incidenceinflation: Estimate R0 Given Case Reporting Delays

undetected_prob

R Documentation

Probability case remains undetected over time

This is effectively a survival function, which shows the probability that an actual case originating on day t_onset remains unreported at t_1.

undetected_prob(t_1, t_onset, reporting_parameters)

`t_1`	observation time subsequent to time when case originates: t1>=t0
`t_onset`	time when case originates
`reporting_parameters`	named list of 'mean' and 'sd' of gamma distribution characterising the reporting delay distribution

a probability

incidenceinflation:::undetected_prob(2, 1, list(mean=10, sd=5))

ben18785/incidenceinflation documentation built on Feb. 8, 2024, 2:36 a.m.

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