AffyExpressionPDInfoPkgSeed-class: Class "AffyExpressionPDInfoPkgSeed"

In benilton/pdInfoBuilder: Platform Design Information Package Builder

Class "AffyExpressionPDInfoPkgSeed"

Description

PD Info Package Seed for Affymetrix Expression Arrays

Objects from the Class

Objects can be created by calls of the form new("AffyExpressionPDInfoPkgSeed", cdfFile, csvAnnoFile, tabSeqFile, ...).

Slots

cdfFile:

CDF filename

celFile:

CEL filename

tabSeqFile:

TAB sequence file

chipName:

Name of the chip or platform

manufacturer:

chip/platform manufacturer

url:

chip URL

genomebuild:

The genome build this platform is based upon.

organism:

organism for chip.

species:

species for chip.

version:

A character vector giving the version number of the package.

license:

The license of the package

author:

Author of the package

email:

An email address to use in the Maintainer field

biocViews:

Character data for the biocViews field of the DESCRIPTION file

Methods

chipName

chipName

getGeometry

initialize

makePdInfoPackage

package creator

Examples

showClass("AffyExpressionPDInfoPkgSeed")

benilton/pdInfoBuilder documentation built on July 3, 2024, 12:23 p.m.