derepFasta: derepFasta creates a derep-class object from a fasta file, by...

In benjjneb/dada2: Accurate, high-resolution sample inference from amplicon sequencing data

derepFasta creates a derep-class object from a fasta file, by creating a corresponding fastq file with a uniform quality score and calling derepFastq.

Description

derepFasta creates a derep-class object from a fasta file, by creating a corresponding fastq file with a uniform quality score and calling derepFastq.

Usage

derepFasta(fls, ...)

Arguments

fls	(Required). character. The file path(s) to the fasta or gzipped fasta file(s).
...	(Optional). Additional arguments passed on to derepFastq

benjjneb/dada2 documentation built on Dec. 5, 2024, 4:02 p.m.