adaptiveHM.main.stHM: Detect DE genes by stHM
In benliemory/adaptiveHM: Adaptive Hierarchical Model (adaptiveHM)

Description Usage Arguments Author(s)

stHM divides all genes into a few groups and HM is applied in each group while swHM applies HM in the "neighbouring" genes. Only rank information from historical data is used.

1	adaptiveHM.main.stHM(Control, Treatment, IPBT.prior = FALSE, groupNumber = 20, history = NA, IPBT.id = NA)

`Control`	Data matrix for control samples.
`Treatment`	Data matrix for treatment samples.
`IPBT.prior`	Logical value to specify using external historical data or IPBT prior.
`groupNumber`	Number of groups used in stHM. It is better to use GDM to determine optimal number of groups first.
`history`	External historical data is required to provide if using external historical data.
`IPBT.id`	IPBT prior id is required if using IPBT prior.