dot-loadPeaks: load peaks from TFregulomeR

.loadPeaksR Documentation

load peaks from TFregulomeR

Description

This function allows you to obtain the peaks from TFregulomeR using TFregulomeR ID.

Usage

.loadPeaks(id, includeMotifOnly = FALSE, api_object)

Arguments

id

Required. TFregulomeR ID

includeMotifOnly

Either TRUE or FALSE (default). If TRUE, only peaks with motif will be returned

api_object

s4 object for interacting with the TFregulome database

Value

a data.frame containing peak coordinates

Examples

CEBPB_peaks <- .loadPeaks(id = "MM1_HSA_K562_CEBPB")

benoukraflab/TFregulomeR documentation built on July 8, 2024, 5:03 p.m.