dot-loadPeaks: load peaks from TFregulomeR
In benoukraflab/TFregulomeR: TFregulomeR reveals transcription factors’ context-specific features and functions
.loadPeaks R Documentation
load peaks from TFregulomeR
Description
This function allows you to obtain the peaks from TFregulomeR using TFregulomeR ID.
Usage
.loadPeaks(id, includeMotifOnly = FALSE, api_object)
Arguments
id
Required. TFregulomeR ID
includeMotifOnly
Either TRUE or FALSE (default). If TRUE, only peaks with motif will be returned
api_object
s4 object for interacting with the TFregulome database
Value
a data.frame containing peak coordinates
Examples
CEBPB_peaks <- .loadPeaks(id = "MM1_HSA_K562_CEBPB")
benoukraflab/TFregulomeR documentation built on July 8, 2024, 5:03 p.m.
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| .loadPeaks | R Documentation |
load peaks from TFregulomeR
Description
This function allows you to obtain the peaks from TFregulomeR using TFregulomeR ID.
Usage
.loadPeaks(id, includeMotifOnly = FALSE, api_object)
Arguments
id |
Required. TFregulomeR ID |
includeMotifOnly |
Either TRUE or FALSE (default). If TRUE, only peaks with motif will be returned |
api_object |
s4 object for interacting with the TFregulome database |
Value
a data.frame containing peak coordinates
Examples
CEBPB_peaks <- .loadPeaks(id = "MM1_HSA_K562_CEBPB")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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