rm_diann_contaminants: Rm contaminants

In bhagwataditya/autonomics: Unified statistal Modeling of Omics Data

Rm contaminants

Description

Rm contaminants from DIA-NN SumExp

Usage

rm_diann_contaminants(
  object,
  contaminants = read_contaminants(),
  verbose = TRUE
)

Arguments

object	SummarizedExperiment
contaminants	uniprots (character vector)
verbose	TRUE or FALSE

Value

SummarizedExperiment

Examples

file <- download_data('dilution.report.tsv')
object <- read_diann_proteingroups(file)
object %<>% rm_diann_contaminants()

bhagwataditya/autonomics documentation built on Nov. 1, 2024, 5:47 a.m.