stri_detect_fixed_in_collapsed: Detect fixed patterns in collapsed strings
In bhagwataditya/autonomics: Unified Statistical Modeling of Omics Data

stri_detect_fixed_in_collapsed

R Documentation

Detect fixed patterns in collapsed strings

Description

Detect fixed patterns in collapsed strings

Usage

stri_detect_fixed_in_collapsed(x, patterns, sep)

Arguments

`x`	vector with collapsed strings
`patterns`	vector with fixed patterns (strings)
`sep`	collapse separator (string) or NULL (if uncollapsed)

Value

boolean vector

Examples

file <- system.file('extdata/fukuda20.proteingroups.txt', package = 'autonomics')
object <- read_maxquant_proteingroups(file)
x <- fdt(object)$uniprot
patterns <- c('A0A0R4IKT8', 'Q7T3G6')
table(stri_detect_fixed_in_collapsed(x = x, patterns = patterns, sep = ';'))

bhagwataditya/autonomics documentation built on Dec. 1, 2024, 12:27 a.m.