autonomics: Unified Statistical Modeling of Omics Data

systematic_nas

R Documentation

Is systematic/random/full NA

Description

Is systematic/random/full NA

Usage

systematic_nas(object, by = "subgroup", frac = 0.5)

random_nas(object, by = "subgroup")

no_nas(object)

Arguments

`object`	SummarizedExperiment
`by`	svar (string)
`frac`	fraction

Examples

file <- system.file('extdata/fukuda20.proteingroups.txt', package = 'autonomics')
object <- read_maxquant_proteingroups(file)
table(systematic_nas(object))   # missing in some subgroups, present in others
table(random_nas(object))       # missing in some samples, independent of subgroup
table(no_nas(object))           # missing in no samples

bhagwataditya/autonomics documentation built on Dec. 1, 2024, 12:27 a.m.