abstract_fit: Abstract model fit

abstract_fitR Documentation

Abstract model fit

Description

Abstract model fit

Usage

abstract_fit(
  object,
  sep = guess_fitsep(fdt(object)),
  fit = fits(object),
  coef = coefs(object, fit = fit),
  significancevar = "p",
  significance = 0.05
)

Arguments

object

SummarizedExperiment

sep

string

fit

character vector

coef

character vector

significancevar

'p' or 'fdr'

significance

fraction : pvalue cutoff

Value

SummarizedExperiment

Examples

file <- system.file('extdata/atkin.metabolon.xlsx', package = 'autonomics')
object <- read_metabolon(file, fit = 'limma', coef = 't3')
fdt(object)
fdt(abstract_fit(object))

bhagwataditya/importomics documentation built on June 15, 2024, 1:05 a.m.