TreatmentResponseExperiment-class: TreatmentResponseExperiment class definition

In bhklab/CoreGx: Classes and Functions to Serve as the Basis for Other 'Gx' Packages

TreatmentResponseExperiment class definition

Description

Define a private constructor method to be used to build a TreatmentResponseExperiment object.

Value

TreatmentResponseExperiment object containing the assay data from a treatment response experiment

Slots

rowData

See Slots section.

colData

See Slots section.

assays

See Slots section.

metadata

See Slots section.

.intern

See Slots section.

Slots

• rowData: A data.table containing the metadata associated with the row dimension of a TreatmentResponseExperiment.

• colData: A data.table containing the metadata associated with the column dimension of a TreatmentResponseExperiment.

• assays: A list of data.tables, one for each assay in a TreatmentResponseExperiment.

• metadata: An optional list of additional metadata for a TreatmentResponseExperiment which doesn't map to one of the dimensions.

• .intern: An environment that holds internal structural metadata about a TreatmentResponseExperiment object, such as which columns are required to key the object. An environment has been used to allow locking items, which can prevent accidental modification of a property required for the class to work.

bhklab/CoreGx documentation built on March 14, 2024, 3:04 a.m.