API for bingzhang16/WebGestaltR
Gene Set Analysis Toolkit WebGestaltR

Global functions
.collapseMethodError Source code
.combineG Source code
.dagColorError Source code
.dataTypeError Source code
.enrichMethodError Source code
.enrichmentFunction Source code
.fdrMethodError Source code
.fdrThrError Source code
.getDescription Source code
.getGenes Source code
.getIdType Source code
.getName Source code
.hasError Source code
.hostNameError Source code
.isOutputError Source code
.loadEnrichDatabaseDescriptionFile Source code
.loadGeneSetData Source code
.mappingOutputError Source code
.minMaxNumError Source code
.netwalker Source code
.onAttach Source code
.organismError Source code
.outputDirectoryError Source code
.perNumError Source code
.plotData Source code
.processData Source code
.reportNumError Source code
.returnMaxPos Source code
.sigMethodError Source code
.testMatrixFormat Source code
.toList Source code
.topThrError Source code
.uploadGeneExistingOrganism Source code
.uploadGeneOthers Source code
GOSlimSummary Man page Source code
IDMapping Man page Source code
WebGestaltR Man page Source code
WebGestaltRBatch Man page Source code
WebGestaltRGsea Source code
WebGestaltRNta Source code
WebGestaltROra Source code
WebGestaltR_batch Man page Source code
affinityPropagation Man page Source code
cacheUrl Man page Source code
createNtaReport Man page Source code
createReport Man page Source code
descriptionFileError Source code
enrichDatabaseError Source code
enrichResultSection Man page Source code
expandDag Man page Source code
fillInputDataFrame Man page Source code
formatCheck Man page Source code
geneM Source code
getColorPalette Source code
getDagNodes Source code
getGeneTables Source code
getPaletteForGsea Source code
getTopGseaResults Source code
gmtFormatError Source code
goSlimReport Source code
goSlimSummary Man page Source code
gseaPermutation Man page Source code
idMapping Man page Source code
idMappingError Source code
idMappingGene Source code
idMappingInput Source code
idMappingOutput Source code
idMappingPhosphosite Source code
idToSymbol Man page Source code
idTypeError Source code
identifyStandardId Source code
interestGeneError Source code
is.wholenumber Source code
jaccardSim Man page Source code
keepRep Man page Source code
keggLinkModification Source code
linkModification Man page Source code
listArchiveURL Man page Source code
listArchiveUrl Man page Source code
listGeneSet Man page Source code
listIDType Man page Source code
listIdType Man page Source code
listOrganism Man page Source code
listReferenceSet Man page Source code
loadGeneSet Man page Source code
loadInterestGene Source code
loadReferenceGene Source code
mapUserId Source code
marginalBenefit Source code
marginalGain Source code
mergeDuplicate Source code
oraEnrichment Source code
parameterErrorMessage Source code
plotEnrichmentPlot Source code
prepareGseaInput Man page Source code
prepareInputMatrixGsea Man page Source code
randomWalkEnrichment Source code
readGMT Source code
readGmt Man page Source code
referenceGeneError Source code
removeFileProtocol Source code
replace_null Source code
sanitizeFileName Source code
specificParameterSummaryGsea Man page Source code
specificParameterSummaryOra Man page Source code
stardardDiffError Source code
summaryDescription Man page Source code
swGsea Man page Source code
targetIdTypeError Source code
testNull Source code
urlToFile Source code
webApiError Source code
webRequestError Source code
weightedSetCover Man page Source code
wikiLinkModification Source code
bingzhang16/WebGestaltR documentation built on Dec. 11, 2019, 7:01 a.m.