Files in bingzhang16/WebGestaltR
Gene Set Analysis Toolkit WebGestaltR

.gitignore
DESCRIPTION
NAMESPACE
NEWS.md R/RcppExports.R R/WebGestaltR-package.R R/WebGestaltR.R R/WebGestaltRBatch.R R/WebGestaltRGsea.R R/WebGestaltRNta.R R/WebGestaltROra.R R/affinityPropagation.R R/cacheFile.R R/createNtaReport.R R/createReport.R R/dagUtils.R R/enrichResultSection.R R/errorMessage.R R/formatCheck.R R/goSlimReport.R R/goSlimSummary.R R/gseaEnrichment.R R/idMapping.R R/idMappingGene.R R/idMappingPhosphosite.R R/idMappingUtils.R R/idToSymbol.R R/linkModification.R R/listArchiveURL.R R/listGeneSet.R R/listIdType.R R/listOrganism.R R/listReferenceSet.R R/loadGeneList.R R/loadGeneSet.R R/mergeDuplicate.R R/oraEnrichment.R R/randomWalkEnrichment.R R/readGmt.R R/reportUtils.R R/summaryDescription.R R/swGsea.R R/weightedSetCover.R README.md
inst/extdata/GOSlimExample.txt
inst/extdata/GeneRankList.rnk
inst/extdata/exampleGMT.gmt
inst/extdata/interestingGenes.txt
inst/extdata/referenceGenes.txt
inst/templates/enrichResultSection.mustache
inst/templates/footer.mustache
inst/templates/goSlimReport.mustache
inst/templates/header.mustache
inst/templates/networkContent.mustache
inst/templates/ntaTemplate.mustache
inst/templates/summary.mustache
inst/templates/summaryGsea.mustache
inst/templates/summaryOra.mustache
inst/templates/template.mustache
man/WebGestaltR.Rd man/affinityPropagation.Rd man/cacheUrl.Rd man/createNtaReport.Rd man/createReport.Rd man/enrichResultSection.Rd man/expandDag.Rd man/fillInputDataFrame.Rd man/formatCheck.Rd man/goSlimSummary.Rd man/gseaPermutation.Rd man/idMapping.Rd man/jaccardSim.Rd man/keepRep.Rd man/linkModification.Rd man/listArchiveURL.Rd man/listGeneSet.Rd man/listIdType.Rd man/listOrganism.Rd man/listReferenceSet.Rd man/loadGeneSet.Rd man/prepareGseaInput.Rd man/prepareInputMatrixGsea.Rd man/readGmt.Rd man/specificParameterSummaryGsea.Rd man/specificParameterSummaryOra.Rd man/summaryDescription.Rd man/swGsea.Rd man/weightedSetCover.Rd
src/.gitignore
src/RcppExports.cpp
src/fillInputMatrix.cpp
src/permutation.cpp
bingzhang16/WebGestaltR documentation built on Dec. 11, 2019, 7:01 a.m.