om_boxplot: plot expression box, violin, density plot or merged plots of...
In bioShaun/omplotr: store plot functions & themes for onmath projects

om_boxplot

R Documentation

plot expression box, violin, density plot or merged plots of all above

Description

plot expression box, violin, density plot or merged plots of all above

Usage

om_boxplot(exp_data, samples, plot_type, outdir = NULL)

Arguments

`samples`	sample <-> group map, first column is group id
`plot_type`	type of plot to choose: box, violin, density, all
`outdir`	out put directory, default is NULL, don't output file
`plot_data`	expression matrix

Examples

om_boxplot(exp_test_data, test_sample_data, 'box')
om_boxplot(exp_test_data, test_sample_data, 'violin')
om_boxplot(exp_test_data, test_sample_data, 'density')
om_boxplot(exp_test_data, test_sample_data, 'all')

bioShaun/omplotr documentation built on June 11, 2025, 7:48 a.m.