filterCompartments: Filter compartments using confidence estimates and eigenvalue...
In biobenkj/compartmap: Higher-order chromatin domain inference in single samples from methylation arrays and single cells from scRNA-seq and scATAC-seq
View source: R/filterCompartments.R
filterCompartments R Documentation
Filter compartments using confidence estimates and eigenvalue thresholds
Description
Filter compartments using confidence estimates and eigenvalue thresholds
Usage
filterCompartments(obj, min.conf = 0.7, min.eigen = 0.02)
Arguments
obj
Output of condenseSE or fixCompartments
min.conf
Minimum confidence estimate to use when filtering
min.eigen
Minimum absolute eigenvalue to use when filtering
Value
A filtered/subset of the input object/list
biobenkj/compartmap documentation built on Oct. 18, 2023, 11:11 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/filterCompartments.R
| filterCompartments | R Documentation |
Filter compartments using confidence estimates and eigenvalue thresholds
Description
Filter compartments using confidence estimates and eigenvalue thresholds
Usage
filterCompartments(obj, min.conf = 0.7, min.eigen = 0.02)
Arguments
obj |
Output of condenseSE or fixCompartments |
min.conf |
Minimum confidence estimate to use when filtering |
min.eigen |
Minimum absolute eigenvalue to use when filtering |
Value
A filtered/subset of the input object/list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.