plot_target_gene_expressions: plot the target gene heatmap

In biomedbigdata/SPONGE: Sparse Partial Correlations On Gene Expression

plot the target gene heatmap

Description

plot the target gene heatmap

Usage

plot_target_gene_expressions(
  target,
  target_genes,
  gene_expression,
  meta,
  gtf_raw = NA,
  annotation = NA
)

Arguments

target	the target gene
target_genes	the genes of the module to plot the heatmap with
gene_expression	the gene expression
meta	the meta information for annotations
gtf_raw	defaut NA: if given, will convert to hgnc
annotation	defaut NA: gene annotations

Value

pheatmap heatmap

biomedbigdata/SPONGE documentation built on Feb. 6, 2023, 10:19 p.m.