plot_target_gene_expressions: plot the target gene heatmap

View source: R/fn_spongeffects_utility.R View source: R/biomarker_plots.R

plot_target_gene_expressionsR Documentation

plot the target gene heatmap

Description

plot the target gene heatmap

Usage

plot_target_gene_expressions(
  target,
  target_genes,
  gene_expression,
  meta,
  gtf_raw = NA,
  annotation = NA
)

Arguments

target

the target gene

target_genes

the genes of the module to plot the heatmap with

gene_expression

the gene expression

meta

the meta information for annotations

gtf_raw

defaut NA: if given, will convert to hgnc

annotation

defaut NA: gene annotations

Value

pheatmap heatmap


biomedbigdata/SPONGE documentation built on Feb. 6, 2023, 10:19 p.m.