import_OpenSwath_PyProphet: Import OpenSWATH - PyProphet data
In biospi/bayesprot: Bayesian Protein-level Quantification for Proteomics
Description
Usage
Arguments
Value
Description
Reads in a set of _with_dscore datasets processed by OpenSWATH and PyProphet for processing with bayesprot.
Usage
1
2
import_OpenSwath_PyProphet(files = NULL, shared = F,
m_score.cutoff = 0.01, data = NULL)
Arguments
files
One of more _with_dscore files to import and merge.
m_score.cutoff
Include only features with PyProphet m_score >= than this?
data
Advanced: Rather than specifying files, you can enter a data.frame preloaded with
fread default parameters.
Value
A data.frame for input into bayesprot.
biospi/bayesprot documentation built on Nov. 9, 2019, 2:40 p.m.
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Description Usage Arguments Value
Description
Reads in a set of _with_dscore datasets processed by OpenSWATH and PyProphet for processing with bayesprot.
Usage
1 2 | import_OpenSwath_PyProphet(files = NULL, shared = F,
m_score.cutoff = 0.01, data = NULL)
|
Arguments
files |
One of more |
m_score.cutoff |
Include only features with PyProphet m_score >= than this? |
data |
Advanced: Rather than specifying |
Value
A data.frame for input into bayesprot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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