import_ProteomeDiscoverer: Import Thermo ProteomeDiscoverer data

In biospi/bayesprot: Bayesian Protein-level Quantification for Proteomics

Description

Reads in a Thermo ProteomeDiscoverer PSMs.txt file for processing with bayesprot.

Usage

import_ProteomeDiscoverer(file = NULL, shared = F, used = T,
  data = NULL)

Arguments

file	Location of the PSMs.txt file.
shared	Include shared peptides?
used	Include only features marked as used by ProteomeDiscoverer?
data	Advanced: Rather than specifying file, you can enter a data.frame preloaded with fread default parameters.

Value

A data.frame for input into bayesprot.

biospi/bayesprot documentation built on Nov. 9, 2019, 2:40 p.m.