Man pages for biscuit13161/UNGeneAnno
Collate Gene Annotation Data from Uniprot and NIH Gene Databases
| checkEnsemblArchive | Query Ensembl Archive using Ensembl IDs to confirm whether ID... |
| geneanno-class | An S4 class to represent the base information used by the... |
| gene-class | An S4 class to represent a gene. |
| getEnsembleList | Query Ensembl using Ensembl IDs to find Gene Name |
| getGeneSummary | Create gene specific objects containing data from online... |
| getGroupGeneList | Create unique list of group,gene combinations from input list |
| getNihQuery | create initial NIH Query |
| getNihSummary | Gather NIH Gene Data |
| getPublicationList | Gather NIH Pubmed Data |
| getUniprotSummary | Gather Uniprot Data |
| getUniqueGeneList | Create unique list of genes from input list |
| mygeneanno | 'geneanno' object |
| mygenelist | Input Vector of Drug/Gene Data |
| mygenematrix | Input Matrix of Drug/Gene Data |
| mygenesummaries | Vector Input Vector of Drug/Gene Data |
| myinputlist | Input Vector of Drug/Gene Data |
| mypublications | matrix of 'pubmed' objects |
| parseInputFile | Parse files of gene names and group identifiers to create... |
| produceOutputFiles | Save Gene Information to group Specific Output Files |
| pubmed-class | An S4 class to represent a query to the Pubmed database,... |
| query-class | An S4 class to represent an initial query to the NCBI... |
| searchPublications | Carry out Pubmed search for a matrix |
| ungeneanno-package | Collate Gene Annotation Data from Uniprot and NIH Gene... |
