getEnsembleList: Query Ensembl using Ensembl IDs to find Gene Name
In biscuit13161/UNGeneAnno: Collate Gene Annotation Data from Uniprot and NIH Gene Databases
Description
Usage
Arguments
Value
Methods (by class)
Examples
Description
getEnsembleList contacts the Ensembl Rest API, querying the presence
of an Ensembl ID in the active database.
Should the ID not be found in the active database, checkEnsemblArchive()
is called to check whether it is archived.
Usage
1
2
3
4
getEnsembleList(query)
## S4 method for signature 'character'
getEnsembleList(query)
Arguments
query
a string containing the ID to be queried.
Value
A list detailing the entry in the Ensembl database... or "archived" if present in the archive.
Methods (by class)
-
character: as above.
Examples
1
2
3
query <- "ENSG00000157764"
ret <- getEnsembleList(query)
ret$display_name
biscuit13161/UNGeneAnno documentation built on May 26, 2019, 2:33 a.m.
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Description Usage Arguments Value Methods (by class) Examples
Description
getEnsembleList contacts the Ensembl Rest API, querying the presence
of an Ensembl ID in the active database.
Should the ID not be found in the active database, checkEnsemblArchive()
is called to check whether it is archived.
Usage
1 2 3 4 | getEnsembleList(query)
## S4 method for signature 'character'
getEnsembleList(query)
|
Arguments
query |
a string containing the ID to be queried. |
Value
A list detailing the entry in the Ensembl database... or "archived" if present in the archive.
Methods (by class)
-
character: as above.
Examples
1 2 3 | query <- "ENSG00000157764"
ret <- getEnsembleList(query)
ret$display_name
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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