fcbFlowFrame-class: fcbFlowFrame —————— A containiner for barcoded...

In bjreisman/DebarcodeR: Automated Demultiplexing for Fluorescent Cell Barcoding

fcbFlowFrame —————————————————————————– A containiner for barcoded flow cytometry data, with slots for the barcoded flowFrame, a single level 'uptake control', and a slot to contain the results of the debarcoding functions contained within debarcoder.

Description

fcbFlowFrame —————————————————————————– A containiner for barcoded flow cytometry data, with slots for the barcoded flowFrame, a single level 'uptake control', and a slot to contain the results of the debarcoding functions contained within debarcoder.

Usage

fcbFlowFrame(x, barcodes = list())

Slots

barcoded.ff

Object of classflowFrame containing the barcoded data, approriately compensated, transformed, and gated

uptake.ff

object of class flowFrame containing cells which have been barcoded with a single level of each barcoding channel as well as stained with the approriate barcoding controls

barcodes

a list of barcodes, each one named for the channel from which it was derived

platemap

a platemap for conditions per barcode level

bjreisman/DebarcodeR documentation built on Oct. 22, 2022, 1:50 a.m.