Files in bomeara/chapter2
Creates an Initial Report for a Clade
.Rbuildignore
.github/workflows/woke.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/dataFunctions.R
R/eoldata.R
R/merging_trees_with_MRP.R
R/processdata.R
R/runanalysis.R
README.md
analysis/Fagales_example.R
analysis/merged_Fagales_tree_05-30-19.pdf
analysis/merged_Fagales_tree_05-31-19.pdf
analysis/merged_Fagales_tree_fan_05-31-19.pdf
inst/eol_data.rmd
inst/rmd/summary.Rmd
inst/summary.qmd
man/aggregate_category.Rd
man/check_continuous.Rd
man/check_numeric_vector.Rd
man/contrasts_correlations.Rd
man/convert_continuous_to_discrete.Rd
man/eol_data.Rd
man/eol_traits.Rd
man/eol_traits2.Rd
man/fishbase_genus_query.Rd
man/fishbase_species_query.Rd
man/gbif_species_query.Rd
man/gbif_taxon_query.Rd
man/get_combie_image_summary.Rd
man/get_datelife_all.Rd
man/get_datelife_biggest.Rd
man/get_descendant_species.Rd
man/get_eol.Rd
man/get_genbank_count.Rd
man/get_genbank_count_by_gene.Rd
man/get_location_realm_biome.Rd
man/get_otol.Rd
man/get_pubmed.Rd
man/get_pubmed_count_only.Rd
man/get_pubmed_info_on_OTOL.Rd
man/get_wikipedia_pics.Rd
man/get_wikipedia_summary.Rd
man/locality_add_habitat_biome.Rd
man/locality_clean.Rd
man/match_data.Rd
man/pbdb_taxon_query.Rd
man/phydo_convert_to_Beaulieu_data.Rd
man/phydo_drop_type.Rd
man/phydo_fitGeiger.Rd
man/plot_gis.Rd
man/plot_pubmed_info_on_OTOL.Rd
man/reconstruct_apomorphy.Rd
man/render_phydo.Rd
man/render_quarto.Rd
man/reroot.tree.Rd
man/run_biogeobears.Rd
man/run_misse.Rd
man/run_phydo.Rd
man/spocc_taxon_query.Rd
test.qmd
tests/testthat.R
tests/testthat/test-match_data.R
