get.pedindex: Get pedigree index.

In bowenwang7/r3: Realized Relatedness Estimation and Simulation

Description

get.pedindex returns indices of individuals in the pedigree.

Usage

get.pedindex(pedinfo, member.set)

Arguments

pedinfo	dataframe.
member.set	character vector.

Details

member.set contains member IDs of individuals of interest.

Value

An integer vector of indices for each individual of interest found in pedinfo.

Examples

# a simple pedigree with sibling marriage
pedigree = as.character(rep(1, 5))
member = as.character(c(11, 12, 21, 22, 31))
sex = as.numeric(c(1, 2, 1, 2, 1))
father = as.character(c(NA, NA, 11, 11, 21))
mother = as.character(c(NA, NA, 12, 12, 22))
pedinfo = data.frame(pedigree, member, sex, father, mother, stringsAsFactors = FALSE)

get.pedindex(pedinfo, c("22", "31"))

bowenwang7/r3 documentation built on May 17, 2019, 6:39 p.m.