create_index_set: Merge the background_ls into an index_set

Description Usage Arguments Details Value

View source: R/select_background_variants.R

Description

Merge the background_ls into an index_set

Usage

1
create_index_set(background_ls, snpsnap)

Arguments

background_ls

A list returned by select_background_variants

snpsnap

The SNPsnap dataset returned by read_snpsnap

Details

The returned data.table contains both the foreground variant and matched background variants. Each background variant is marked with the respective foreground variant in the foreground_variant column.

Value

A data.table object


boxiangliu/vsea documentation built on May 20, 2019, 5:56 p.m.