Man pages for boyinggong/methcp
Differential methylation anlsysis for bisulfite sequencing data
| calcLociStat | Calculate the per-cytosine statistics for simple two-group... |
| calcLociStatTimeCourse | Calculate the per-cytosine statistics for time-course data. |
| createBsseqObject | Helper function to read text files and create a bsseq object. |
| getSigRegion | Obtain the significant DMRs. |
| MethCP-class | Class 'MethCP' |
| methcpFromStat | Create a 'MethCP' object given the per-cytosine based tests. |
| segmentMethCP | Perform segmentation on a 'MethCP' object. |
| show-MethCP-method | The show method |
