boyinggong/methcp: Differential methylation anlsysis for bisulfite sequencing data
MethCP is a differentially methylated region (DMR) detecting method for whole-genome bisulfite sequencing (WGBS) data, which is applicable for a wide range of experimental designs beyond the two-group comparisons, such as time-course data. MethCP identifies DMRs based on change point detection, which naturally segments the genome and provides region-level differential analysis.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DifferentialMethylation Sequencing TimeCourse WholeGenome |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.1.6 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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