Description Usage Arguments Details Value Examples
Display the lesion volume by slices using the table_lesion
slot.
1 2 3 4 5 6 | ## S4 method for signature 'MRIaggr'
plotTableLesion(object, mask, num = NULL, type = "matplot",
col = 1:5, lty = 1:5, lwd = 1, mgp = c(2,0.5,0), mar = rep(3,4),
main = paste("lesion - ", object@identifier, sep = ""),
cex.legend = 1, cex.main = 1, cex.axis = 1, cex.lab = 1,
filename = paste(object@identifier, "plotTableLesion", sep = "_"), ...)
|
object |
an object of class |
mask |
the binary contrast parameter indicating the lesion. character. REQUIRED. |
num |
the slices to display. numeric vector or |
type |
the type of plot to display. Can be |
col |
the colors with which the volumes will be displayed. character vector or numeric vector. |
lty |
the line type used to represent the volume. numeric vector. |
lwd |
the line width. postive numeric. |
main |
an overall title for the plot. character. |
mgp |
the margin line for the axis title, axis labels and axis line. positive numeric vector of size 3. |
mar |
the number of margin lines to be specified on the four sides of the plot. positive numeric vector of size 4. |
cex.main |
the expansion factor for the main title. numeric. |
cex.legend |
the expansion factor of the legend. positive numeric. |
cex.axis |
the magnification to be used for axis annotation relative to the current setting of cex. positive numeric. |
cex.lab |
the magnification to be used for x and y labels relative to the current setting of cex. positive numeric. |
filename |
the name of the file used to export the plot. character. |
... |
additional arguments to be passed to |
ARGUMENTS:
Information about the num
argument can be found in the details section of initNum
.
Information about the lty
, lwd
, mar
and mgp
arguments can be found in par
.
Argument(s) ...
must correspond to some of the following arguments : height
, numeric2logical
, path
, res
, unit
, width
, window
.
ARGUMENTS:
Require to have previously filled object@table_lesion
. This can be done using the calcTableLesion
method.
None.
1 2 3 4 5 6 7 8 9 10 | ## load a MRIaggr object
data("MRIaggr.Pat1_red", package = "MRIaggr")
## matplot display of the lesion
plotTableLesion(MRIaggr.Pat1_red, num = 1:3, type = "matplot",
mask = c("MASK_DWI_t0", "MASK_T2_FLAIR_t2"))
## evolution display of the lesion
plotTableLesion(MRIaggr.Pat1_red, num = 1:3, type = "evolution",
mask = c("MASK_DWI_t0", "MASK_T2_FLAIR_t2"))
|
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