compute_stats_list: calculate statistics for list of data

In brandonsie/phipcc: Generate Case-Control Reports from PhIP-seq Data

Description

calculate statistics for list of data

Usage

compute_stats_list(case, ctrl, case_rcp, ctrl_rcp, hit_thresh, rcp_thresh,
  stat_test = "Fisher", pval_correction = "BH")

Arguments

case	Case data list.
ctrl	Control data list.
case_rcp	Case RCP data list.
ctrl_rcp	Control RCP data list.
hit_thresh	Enrichment hit threshold.
rcp_thresh	RCP hit threshold.
stat_test	Statistical test. Currently supports "Fisher"
pval_correction	Multiple hypothesis pvalue correction method. BH default.

brandonsie/phipcc documentation built on June 2, 2020, 6:19 a.m.