Files in brgordon17/coralclass
Metabolomics Classification of Stressed Coral From Heron Island 2011
.Rbuildignore
.gitignore
.zenodo.json
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/coralclass.R
R/create_mzdata.R
R/create_nmrdata.R
R/create_pamdata.R
R/figure_cell_density.R
R/figure_fvfm.R
R/figure_misclass_temporal.R
R/figure_pca.R
R/figure_tuning.R
R/figure_vip.R
R/mzdata_raw.R
R/mzpls.R
R/mzrf.R
R/nmrpls.R
R/nmrrf.R
R/table_annotate.R
R/table_cv_conmat.R
R/table_cv_performance.R
R/table_model_test.R
README.Rmd
README.md
coralclass.Rproj
data-raw/cell-densities.csv
data-raw/example_mzxml_data/class1/sample1.mzXML
data-raw/example_mzxml_data/class1/sample2.mzXML
data-raw/example_mzxml_data/class2/sample3.mzXML
data-raw/example_mzxml_data/class2/sample4.mzXML
data-raw/mzdata-raw.csv
data-raw/nmrdata-raw-0.02.csv
data-raw/pamdata.csv
data/mzdata.rda
data/nmrdata.rda
data/pamdata.rda
inst/extdata/mzdata.csv
inst/extdata/mzpls_model.rds
inst/extdata/mzrf_model.rds
man/coralclass.Rd
man/create_mzdata.Rd
man/create_nmrdata.Rd
man/create_pamdata.Rd
man/figure_cell_density.Rd
man/figure_fvfm.Rd
man/figure_misclass_temporal.Rd
man/figure_pca.Rd
man/figure_tuning.Rd
man/figure_vip.Rd
man/mzdata.Rd
man/mzdata_raw.Rd
man/mzpls.Rd
man/mzrf.Rd
man/nmrdata.Rd
man/nmrpls.Rd
man/nmrrf.Rd
man/pamdata.Rd
man/table_annotate.Rd
man/table_cv_conmat.Rd
man/table_cv_performance.Rd
man/table_model_test.Rd
