coralclass | coralclass: A package style research compendium for the coral... |
create_mzdata | Create mzdata. |
create_nmrdata | create nmrdata. |
create_pamdata | Create pamdata. |
figure_cell_density | Boxplots of cell density. |
figure_fvfm | Plot of Photosynthetic Yield (FvFm). |
figure_misclass_temporal | Temporal misclassifications figure. |
figure_pca | PCA compound figure. |
figure_tuning | Model tuning figure. |
figure_vip | Important variables figure. |
mzdata | Preprocessed LCMS data |
mzdata_raw | Feature detection using xcms. |
mzpls | PLS-DA analysis of LCMS data. |
mzrf | Random Forests Analysis of LCMS data. |
nmrdata | Preprocessed NMR data |
nmrpls | PLS-DA analysis of NMR data. |
nmrrf | Random Forests Analysis of 1H-NMR data. |
pamdata | Mean daily PAM data |
table_annotate | Annotate LCMS features |
table_cv_conmat | Cross validation confusion matrices. |
table_cv_performance | Cross validation performance table. |
table_model_test | Model testing performance table. |
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