prepare_for_svm: A helper function for the SVM analysis
In brickyyyy/SC3min: Minimized Single-Cell Consensus Clustering
Description
Usage
Arguments
Value
Description
Defines train and study cell indeces based on the svm_num_cells and
svm_train_inds input parameters
Usage
1
2
prepare_for_svm(N, svm_num_cells = NULL, svm_train_inds = NULL,
svm_max)
Arguments
N
number of cells in the input dataset
svm_num_cells
number of random cells to be used for training
svm_train_inds
indeces of cells to be used for training
svm_max
define the maximum number of cells below which SVM is not run
Value
A list of indeces of the train and the study cells
brickyyyy/SC3min documentation built on May 8, 2019, 8:07 a.m.
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Description Usage Arguments Value
Description
Defines train and study cell indeces based on the svm_num_cells and svm_train_inds input parameters
Usage
1 2 | prepare_for_svm(N, svm_num_cells = NULL, svm_train_inds = NULL,
svm_max)
|
Arguments
N |
number of cells in the input dataset |
svm_num_cells |
number of random cells to be used for training |
svm_train_inds |
indeces of cells to be used for training |
svm_max |
define the maximum number of cells below which SVM is not run |
Value
A list of indeces of the train and the study cells
R Package Documentation
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