AMARETTO_CreateModuleData: AMARETTO_CreateModuleData
In broadinstitute/PerturbationAMARETTO: Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
Description
Usage
Arguments
Value
Examples
Description
AMARETTO_CreateModuleData
Usage
1
AMARETTO_CreateModuleData(AMARETTOinit, AMARETTOresults)
Arguments
AMARETTOinit
List output from AMARETTO_Initialize().
AMARETTOresults
List output from AMARETTO_Run()
Value
result
Examples
1
2
3
4
5
data('ProcessedDataLIHC')
AMARETTOinit <- AMARETTO_Initialize(ProcessedData = ProcessedDataLIHC,
NrModules = 2, VarPercentage = 50)
AMARETTOresults <- AMARETTO_Run(AMARETTOinit)
AMARETTO_MD <- AMARETTO_CreateModuleData(AMARETTOinit, AMARETTOresults)
broadinstitute/PerturbationAMARETTO documentation built on Nov. 4, 2019, 8:14 a.m.
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Description Usage Arguments Value Examples
Description
AMARETTO_CreateModuleData
Usage
1 | AMARETTO_CreateModuleData(AMARETTOinit, AMARETTOresults)
|
Arguments
AMARETTOinit |
List output from AMARETTO_Initialize(). |
AMARETTOresults |
List output from AMARETTO_Run() |
Value
result
Examples
1 2 3 4 5 | data('ProcessedDataLIHC')
AMARETTOinit <- AMARETTO_Initialize(ProcessedData = ProcessedDataLIHC,
NrModules = 2, VarPercentage = 50)
AMARETTOresults <- AMARETTO_Run(AMARETTOinit)
AMARETTO_MD <- AMARETTO_CreateModuleData(AMARETTOinit, AMARETTOresults)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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