AMARETTO_Run: AMARETTO_Run Function to run AMARETTO, a statistical...

Description Usage Arguments Value Examples

View source: R/amaretto_functions.R

Description

AMARETTO_Run Function to run AMARETTO, a statistical algorithm to identify cancer drivers by integrating a variety of omics data from cancer and normal tissue.

Usage

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AMARETTO_Run(AMARETTOinit)

Arguments

AMARETTOinit

List output from AMARETTO_Initialize().

Value

result

Examples

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data('ProcessedDataLIHC')
AMARETTOinit <- AMARETTO_Initialize(ProcessedData = ProcessedDataLIHC,
                                    NrModules = 2, VarPercentage = 50)
AMARETTOresults <- AMARETTO_Run(AMARETTOinit)

broadinstitute/PerturbationAMARETTO documentation built on Nov. 4, 2019, 8:14 a.m.