get_firehoseData: get_firehoseData

Description Usage Value

View source: R/amaretto_download.R

Description

Downloading TCGA dataset via firehose

Usage

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get_firehoseData(TargetDirectory = "./",
  TCGA_acronym_uppercase = "LUAD", dataType = "stddata",
  dataFileTag = "mRNAseq_Preprocess.Level_3", FFPE = FALSE,
  fileType = "tar.gz",
  gdacURL = "http://gdac.broadinstitute.org/runs/", untarUngzip = TRUE,
  printDisease_abbr = FALSE)

Value

result


broadinstitute/PerturbationAMARETTO documentation built on Nov. 4, 2019, 8:14 a.m.