API for brunocontrino/Doscheda
A DownStream Chemo-Proteomics Analysis Pipeline

Global functions
ChemoProtSet-class Man page
DoschedaSet Man page
boxplot,ChemoProtSet-method Man page
corrPlot Man page
corrPlot,ANY,ANY-method Man page
corrPlot,ChemoProtSet-method Man page
densityPlot Man page
densityPlot,ANY,ANY-method Man page
densityPlot,ChemoProtSet-method Man page
doscheda Man page
doscheda-package Man page
doschedaApp Man page Source code
doschedaData Man page
fitModel Man page
fitModel,ANY,ANY-method Man page
fitModel,ChemoProtSet-method Man page
fit_model Source code
getDatasets Man page
getDatasets,ANY,ANY-method Man page
getDatasets,ChemoProtSet-method Man page
getFinal Man page
getFinal,ANY,ANY-method Man page
getFinal,ChemoProtSet-method Man page
getInput Man page
getInput,ANY,ANY-method Man page
getInput,ChemoProtSet-method Man page
getNorm Man page
getNorm,ANY,ANY-method Man page
getNorm,ChemoProtSet-method Man page
getParameters Man page
getParameters,ANY,ANY-method Man page
getParameters,ChemoProtSet-method Man page
index_matrix Source code
makeReport Man page Source code
meanSdPlot Man page
meanSdPlot,ANY,ANY-method Man page
meanSdPlot,ChemoProtSet-method Man page
normalize_data Source code
panel_shadeNtext Source code
pcaPlot Man page
pcaPlot,ANY,ANY-method Man page
pcaPlot,ChemoProtSet-method Man page
peptide_match Source code
plot.ChemoProtSet Man page Source code
processedExample Man page
removePeptides Man page
removePeptides,ANY,ANY-method Man page
removePeptides,ChemoProtSet-method Man page
remove_peptides Source code
replicatePlot Man page
replicatePlot,ANY,ANY-method Man page
replicatePlot,ChemoProtSet-method Man page
runDoscheda Man page Source code
runNormalisation Man page
runNormalisation,ANY,ANY-method Man page
runNormalisation,ChemoProtSet-method Man page
setData Man page
setData,ANY,ANY-method Man page
setData,ChemoProtSet-method Man page
setParameters Man page
setParameters,ANY,ANY-method Man page
setParameters,ChemoProtSet-method Man page
shape_for_ggplot_perc Source code
shape_for_ggplot_pred Source code
standard_names Source code
uniprotGene Source code
volcanoPlot Man page
volcanoPlot,ANY,ANY-method Man page
volcanoPlot,ChemoProtSet-method Man page
brunocontrino/Doscheda documentation built on Oct. 31, 2017, 10:27 p.m.