brunocontrino/Doscheda: A DownStream Chemo-Proteomics Analysis Pipeline

Doscheda focuses on quantitative chemoproteomics used to determine protein interaction profiles of small molecules from whole cell or tissue lysates using Mass Spectrometry data. The package provides a shiny application to run the pipeline, several visualisations and a downloadable report of an experiment.

Getting started

Package details

AuthorBruno Contrino, Piero Ricchiuto
Bioconductor views DataImport MassSpectrometry Normalization Preprocessing Proteomics QualityControl Regression
MaintainerBruno Contrino <[email protected]>
LicenseGPL-3
Version1.1.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("brunocontrino/Doscheda")
brunocontrino/Doscheda documentation built on Feb. 14, 2018, 2:22 p.m.