Files in brunocontrino/Doscheda
A DownStream Chemo-Proteomics Analysis Pipeline

.Rproj.user/2F23DFD9/persistent-state
.Rproj.user/2F23DFD9/saved_source_markers
.Rproj.user/2F23DFD9/sdb/prop/1512CC7F
.Rproj.user/2F23DFD9/sdb/prop/15504469
.Rproj.user/2F23DFD9/sdb/prop/19E34C00
.Rproj.user/2F23DFD9/sdb/prop/20DA7B3
.Rproj.user/2F23DFD9/sdb/prop/22B48985
.Rproj.user/2F23DFD9/sdb/prop/26518B0D
.Rproj.user/2F23DFD9/sdb/prop/28DC68A2
.Rproj.user/2F23DFD9/sdb/prop/2C83A9DE
.Rproj.user/2F23DFD9/sdb/prop/2E475DFC
.Rproj.user/2F23DFD9/sdb/prop/3192918F
.Rproj.user/2F23DFD9/sdb/prop/3283FE95
.Rproj.user/2F23DFD9/sdb/prop/35A9C415
.Rproj.user/2F23DFD9/sdb/prop/37B60D8
.Rproj.user/2F23DFD9/sdb/prop/38067E2A
.Rproj.user/2F23DFD9/sdb/prop/3EDD2C1
.Rproj.user/2F23DFD9/sdb/prop/46BA1E45
.Rproj.user/2F23DFD9/sdb/prop/4B42FEB4
.Rproj.user/2F23DFD9/sdb/prop/5BE8B9FB
.Rproj.user/2F23DFD9/sdb/prop/63219BD3
.Rproj.user/2F23DFD9/sdb/prop/6364DE2A
.Rproj.user/2F23DFD9/sdb/prop/68199AD
.Rproj.user/2F23DFD9/sdb/prop/6AC7E48F
.Rproj.user/2F23DFD9/sdb/prop/6BCFFE37
.Rproj.user/2F23DFD9/sdb/prop/6F0D0CCB
.Rproj.user/2F23DFD9/sdb/prop/6F6888D2
.Rproj.user/2F23DFD9/sdb/prop/6FCAE61B
.Rproj.user/2F23DFD9/sdb/prop/70350DCB
.Rproj.user/2F23DFD9/sdb/prop/733EE57B
.Rproj.user/2F23DFD9/sdb/prop/78B5803
.Rproj.user/2F23DFD9/sdb/prop/7A74E222
.Rproj.user/2F23DFD9/sdb/prop/829BE131
.Rproj.user/2F23DFD9/sdb/prop/885F24DE
.Rproj.user/2F23DFD9/sdb/prop/8EFF72E6
.Rproj.user/2F23DFD9/sdb/prop/9BF55FF4
.Rproj.user/2F23DFD9/sdb/prop/9CFD7E07
.Rproj.user/2F23DFD9/sdb/prop/A665D7A3
.Rproj.user/2F23DFD9/sdb/prop/AAAA758
.Rproj.user/2F23DFD9/sdb/prop/AFC1F82
.Rproj.user/2F23DFD9/sdb/prop/AFE280B9
.Rproj.user/2F23DFD9/sdb/prop/B5C88533
.Rproj.user/2F23DFD9/sdb/prop/BC15CB4A
.Rproj.user/2F23DFD9/sdb/prop/BF993472
.Rproj.user/2F23DFD9/sdb/prop/C1B81F3E
.Rproj.user/2F23DFD9/sdb/prop/CBF4FD2C
.Rproj.user/2F23DFD9/sdb/prop/D5D8DDA5
.Rproj.user/2F23DFD9/sdb/prop/D6729CF7
.Rproj.user/2F23DFD9/sdb/prop/D983BA89
.Rproj.user/2F23DFD9/sdb/prop/DB2C989A
.Rproj.user/2F23DFD9/sdb/prop/EA59D6A6
.Rproj.user/2F23DFD9/sdb/prop/EE777451
.Rproj.user/2F23DFD9/sdb/prop/F2DA46A1
.Rproj.user/2F23DFD9/sdb/prop/F3EE2190
.Rproj.user/2F23DFD9/sdb/prop/INDEX
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/11EE3DC8
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/24EF1B21
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/2502F119
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/3DA0F8E2
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/4BAB9A4
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/4F2ED84B
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/532A75F4
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/6CE79AE7
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/6F1AC19C
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/72C11ED3
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/7AF1E76A
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/7D7013E5
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/92A3C7E9
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/9A83FB4B
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/AB30D9D6
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/B7D5BD1B
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/BAA62904
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/C902BAE1
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/CB4E6DF6
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/D14307C8
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/E51DE3C0
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/F21156E1
.Rproj.user/2F23DFD9/sdb/s-EB795C8D/lock_file
.Rproj.user/2F23DFD9/session-persistent-state
.Rproj.user/shared/notebooks/468F481B-Doscheda/1/2F23DFD9/chunks.json
.Rproj.user/shared/notebooks/468F481B-Doscheda/1/s/chunks.json
.Rproj.user/shared/notebooks/525BA718-report/1/2F23DFD9/chunks.json
.Rproj.user/shared/notebooks/525BA718-report/1/s/chunks.json
.Rproj.user/shared/notebooks/599D8485-vignette/1/s/chunks.json
.Rproj.user/shared/notebooks/paths
.gitignore
DESCRIPTION
NAMESPACE
R/accessor.R R/boxplot.ChemoProtSet.R R/corrPlot.R R/data_doc.R R/densityPlot.R R/doscheda.R R/doschedaApp.R R/doschedaset.R R/fitModel.R R/makeReport.R R/meanSdPlot.R R/non_exported.R R/pcaPlot.R R/plot.ChemoProtSet.R R/removePeptides.R R/replicatePlot.R R/runDoscheda.R R/runNormalisation.R R/setData.R R/setParameters.R R/volcanoPlot.R README.md
data/doschedaData.rda
data/processedExample.rda
inst/NEWS
inst/rmd/report.Rmd
inst/shiny-examples/DOSCHEDA_app/CRAPOME_ECOLI
inst/shiny-examples/DOSCHEDA_app/CRAPOME_HUMAN
inst/shiny-examples/DOSCHEDA_app/CRAPOME_YEAST
inst/shiny-examples/DOSCHEDA_app/KinaseFile.csv
inst/shiny-examples/DOSCHEDA_app/Kinesis_ThermoFisher.csv
inst/shiny-examples/DOSCHEDA_app/app.R
inst/shiny-examples/DOSCHEDA_app/introduction.html
inst/shiny-examples/DOSCHEDA_app/report.Rmd inst/shiny-examples/DOSCHEDA_app/sigmoidaltext.Rmd
inst/shiny-examples/DOSCHEDA_app/www/doschedaintensity.gif
inst/shiny-examples/DOSCHEDA_app/www/logo.png
inst/shiny-examples/DOSCHEDA_app/www/logochange.png
inst/shiny-examples/DOSCHEDA_app/www/logogifopt.gif
inst/shiny-examples/DOSCHEDA_app/www/stage1step1.gif
inst/shiny-examples/DOSCHEDA_app/www/stage1step2.gif
inst/shiny-examples/DOSCHEDA_app/www/stage1step3.gif
inst/shiny-examples/DOSCHEDA_app/www/stage1step4.gif
inst/shiny-examples/DOSCHEDA_app/www/styleupdates2.css
inst/shiny-examples/DOSCHEDA_app/www/titleogo.png
man/ChemoProtSet-class.Rd man/boxplot-ChemoProtSet-method.Rd man/corrPlot-methods.Rd man/densityPlot-methods.Rd man/doscheda.Rd man/doschedaApp.Rd man/doschedaData.Rd man/fitModel-methods.Rd man/getDatasets-methods.Rd man/getFinal-methods.Rd man/getInput-methods.Rd man/getNorm-methods.Rd man/getParameters-methods.Rd man/makeReport.Rd man/meanSdPlot-methods.Rd man/pcaPlot-methods.Rd man/plot.ChemoProtSet.Rd man/processedExample.Rd man/removePeptides-methods.Rd man/replicatePlot-methods.Rd man/runDoscheda.Rd man/runNormalisation-methods.Rd man/setData-methods.Rd man/setParameters-methods.Rd man/volcanoPlot-methods.Rd tests/testthat.R tests/testthat/test-normal.R vignettes/Doscheda.Rmd
brunocontrino/Doscheda documentation built on Sept. 14, 2020, 4:45 p.m.