API for buenrostrolab/FigR
Functional Inference of Gene Regulation (FigR) using paired single cell ATAC-seq and RNA-seq data
| Global functions | |
|---|---|
| PeakGeneCor | Source code |
| all.unique | Source code |
| cell_pairing | Man page Source code |
| centerCounts | Man page Source code |
| chunkCore | Source code |
| chunk_CCA | Source code |
| dorcJPlot | Man page Source code |
| extractTFNames | Man page Source code |
| getDORCScores | Man page Source code |
| get_pair_list | Source code |
| motifPeakZtest | Man page Source code |
| pairCells | Man page Source code |
| plotDrivers | Man page Source code |
| plotMarker2D | Man page Source code |
| plotPairs | Man page Source code |
| plotfigRHeatmap | Man page Source code |
| plotfigRNetwork | Man page Source code |
| rankDrivers | Man page Source code |
| runFigRGRN | Man page Source code |
| runGenePeakcorr | Man page Source code |
| smartUpSample | Source code |
| smoothScoresNN | Man page Source code |
| splitAndFetch | Man page Source code |
| umap_knn_graph | Source code |
