get_gene_snp: Match genes with SNPs
In byandell/CCSanger: Utilities to get and use Sanger data for Collaborative Cross
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Find features that overlap with SNPs
Usage
1
2
get_gene_snp(snp_tbl, feature_tbl, feature_snp = get_feature_snp(snp_tbl,
feature_tbl, 0))
Arguments
snp_tbl
tbl of SNPs from assoc.map
feature_tbl
tbl of feature information from query_variants; see package qtl2db
feature_snp
tbl of feature information from get_feature_snp
Value
tbl of genes covering SNPs
Author(s)
Brian S Yandell, brian.yandell@wisc.edu
Examples
1
## Not run: get_gene_snp(snp_tbl, feature_tbl)
byandell/CCSanger documentation built on May 13, 2019, 9:26 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) Examples
Description
Find features that overlap with SNPs
Usage
1 2 | get_gene_snp(snp_tbl, feature_tbl, feature_snp = get_feature_snp(snp_tbl,
feature_tbl, 0))
|
Arguments
snp_tbl |
tbl of SNPs from |
feature_tbl |
tbl of feature information from |
feature_snp |
tbl of feature information from |
Value
tbl of genes covering SNPs
Author(s)
Brian S Yandell, brian.yandell@wisc.edu
Examples
1 | ## Not run: get_gene_snp(snp_tbl, feature_tbl)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.