getDrugActivityData: Returns a matrix containing activity (-logGI50) data for a...

In cannin/rcellminer: rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines

Returns a matrix containing activity (-logGI50) data for a set of compounds.

Description

Returns a matrix containing activity (-logGI50) data for a set of compounds.

Usage

getDrugActivityData(nscSet, onlyCellMinerExps = TRUE)

Arguments

nscSet	A string specifying the NSC identifiers for the compounds.
onlyCellMinerExps	A logical value indicating whether to compute results using only experimental data included in CellMiner (default=TRUE).

Value

a matrix with NCI-60 average (over experiments) -logGI50 activity data; compound activity profiles are along rows.

Examples

nscSet <- c("141540", "123127") # Etoposide, Doxorubicin.
actData <- getDrugActivityData(nscSet)

cannin/rcellminer documentation built on Aug. 11, 2024, 8:45 a.m.