refine_denovo_signatures: De novo signatures refinement.
In caravagnalab/basilica: bascule
refine_denovo_signatures R Documentation
De novo signatures refinement.
Description
Function to refine the inferred de novo signatures.
The function performs a linear combination between de novo and reference
signatures. If a de novo signature can be explained as a linear combination
of one or more reference signatures, it will be removed and its exposures
will be distributed among the similar signatures.
Usage
refine_denovo_signatures(x, types = get_types(x))
Arguments
x
bascule object.
types
List of variant types to perform de novo refinement on.
Value
bascule object.
caravagnalab/basilica documentation built on June 11, 2025, 10:18 p.m.
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| refine_denovo_signatures | R Documentation |
De novo signatures refinement.
Description
Function to refine the inferred de novo signatures. The function performs a linear combination between de novo and reference signatures. If a de novo signature can be explained as a linear combination of one or more reference signatures, it will be removed and its exposures will be distributed among the similar signatures.
Usage
refine_denovo_signatures(x, types = get_types(x))
Arguments
x |
bascule object. |
types |
List of variant types to perform de novo refinement on. |
Value
bascule object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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