plot_phylogeny: Clonal evolution trees
In caravagnalab/lineaGT: lineaGT
View source: R/plots_phylogenies.R
plot_phylogeny R Documentation
Clonal evolution trees
Description
Clonal evolution trees
Usage
plot_phylogeny(x, show_best = 1, min_frac = 0, highlight = c())
Arguments
x
a mvnmm object.
show_best
the number of trees to visualize based on the computed score.
min_frac
value in [0,1] representing the minimum abundance to show the clusters.
highlight
a list of labels ID to show.
Value
A list of ggplot objects with the estimated clone trees.
caravagnalab/lineaGT documentation built on June 13, 2025, 6:01 p.m.
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View source: R/plots_phylogenies.R
| plot_phylogeny | R Documentation |
Clonal evolution trees
Description
Clonal evolution trees
Usage
plot_phylogeny(x, show_best = 1, min_frac = 0, highlight = c())
Arguments
x |
a |
show_best |
the number of trees to visualize based on the computed score. |
min_frac |
value in |
highlight |
a list of labels ID to show. |
Value
A list of ggplot objects with the estimated clone trees.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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