carinademel/RNAlife: Quantifying kinetic parameters to determine the RNA life cycle

RNAlife provides a model to normalize different RNA-seq, 4sU-seq and TT-seq samples on a global scale against each other, assuming that external spike-ins are present. This framework allows the detection of global changes in synthesis and degradation rates, that are also estimated within the RNAlife package.

Getting started

Package details

AuthorCarina Demel
MaintainerCarina Demel <cdemel@mpibpc.mpg.de>
LicenseGPL (>= 3)
Version0.5
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("carinademel/RNAlife")
carinademel/RNAlife documentation built on May 13, 2019, 12:43 p.m.