Quality control (QC) pipeline for ChIP-seq data using a comprehensive set of QC metrics, including previously proposed metrics as well as novel ones, based on local characteristics of the enrichment profile. The package provides functions to calculate a set of QC metrics, a compendium with reference values and machine learning models to score sample quality.
|Author||Carmen Maria Livi|
|Bioconductor views||ChIPSeq QualityControl|
|Maintainer||Carmen Maria Livi <[email protected]>|
|Package repository||View on GitHub|
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