listAvailableElements: Shows available chromatin marks and factors
In carmencita/ChIC: Quality Control Pipeline for ChIP-Seq Data
Description
Usage
Arguments
Value
Examples
View source: R/listFunctions.R
Description
Lists chromatin marks and transcription factors that are available
to be used for the comparison analysis by the fuctions
metagenePlotsForComparison(), plotReferenceDistribution()
and predictionScore().
listAvailableElements
Usage
1
listAvailableElements(target)
Arguments
target
String, chromatin mark or transcription factor to be analysed.
With the keywords "mark" and "TF" the respective lists with the available
elements are listed.
Value
List of elements or single string
Examples
1
2
3
4
listAvailableElements(target="CTCF")
listAvailableElements(target="H3K36me3")
listAvailableElements(target="TF")
listAvailableElements(target="mark")
carmencita/ChIC documentation built on April 28, 2021, 7:20 p.m.
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Description Usage Arguments Value Examples
View source: R/listFunctions.R
Description
Lists chromatin marks and transcription factors that are available to be used for the comparison analysis by the fuctions metagenePlotsForComparison(), plotReferenceDistribution() and predictionScore().
listAvailableElements
Usage
1 | listAvailableElements(target)
|
Arguments
target |
String, chromatin mark or transcription factor to be analysed. With the keywords "mark" and "TF" the respective lists with the available elements are listed. |
Value
List of elements or single string
Examples
1 2 3 4 | listAvailableElements(target="CTCF")
listAvailableElements(target="H3K36me3")
listAvailableElements(target="TF")
listAvailableElements(target="mark")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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