inst/unitTests/Known_invariance.R
In cbg-ethz/nempi: Inferring unobserved perturbations from gene expression data
sim <- mnem::simData(Sgenes=5,Nems=1,nCells=100)
D <- (sim$data-0.5)/0.5
D <- D + rnorm(length(D))
known <- sample(seq_len(ncol(D)),floor(0.5*ncol(D)))
colnames(D)[!seq_len(ncol(D)) %in% known] <- ""
result <- nempi(D,full=FALSE)
checkTrue(all(colnames(D)[known]==colnames(sim$data)[known]))
cbg-ethz/nempi documentation built on Nov. 9, 2023, 3:46 p.m.
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sim <- mnem::simData(Sgenes=5,Nems=1,nCells=100)
D <- (sim$data-0.5)/0.5
D <- D + rnorm(length(D))
known <- sample(seq_len(ncol(D)),floor(0.5*ncol(D)))
colnames(D)[!seq_len(ncol(D)) %in% known] <- ""
result <- nempi(D,full=FALSE)
checkTrue(all(colnames(D)[known]==colnames(sim$data)[known]))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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